EnhancerDB
  1. Home
  2. SNP
  3. rs540708941[chr12:125321350]
Enhancers that have rs540708941[chr12:125321350]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125303965 125343315 enh2677
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540708941[chr12:125321350]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125321338 125321359 IRF1 JASPAR yes 124424835
chr12 125321341 125321355 IRF7 JASPAR yes 124424836
Genes associated with rs540708941[chr12:125321350], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More