EnhancerDB
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  3. rs540709403[chr17:63624817]
Enhancers that have rs540709403[chr17:63624817]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 63620705 63631895 enh32290
Prostate (PC-3) Liver (HepG2) Lung (PC-9) Esophagus Astrocyte Lung (A549) Stomach Thyroid Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs540709403[chr17:63624817]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 63621200 63624818 ZNF274 GTRD no Blood (GM12878) 108284003
chr17 63623103 63625962 AR GTRD no Prostate (PC-3) 21781432
chr17 63623103 63625962 AR GTRD no Prostate (PC-3) 108284006
chr17 63624082 63625845 ZNF274 GTRD no Bone Marrow (K562) 108284008
chr17 63624280 63624850 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21781436
chr17 63624280 63624850 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108284013
chr17 63624489 63624829 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21781454
chr17 63624489 63624829 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108284033
chr17 63624816 63624832 RFX2 JASPAR yes 55385686
chr17 63624816 63624832 RFX3 JASPAR yes 55385687
chr17 63624816 63624832 RFX4 JASPAR yes 55385688
chr17 63624816 63624832 RFX5 JASPAR yes 55385689
Genes associated with rs540709403[chr17:63624817], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More