EnhancerDB
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  3. rs540730062[chr17:65380393]
Enhancers that have rs540730062[chr17:65380393]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65375805 65390455 enh32308
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs540730062[chr17:65380393]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65380387 65380401 TLX1 JASPAR yes 55496347
chr17 65380388 65380402 TLX1 JASPAR yes 55496348
Genes associated with rs540730062[chr17:65380393], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More