EnhancerDB
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  3. rs540736209[chr2:38922816]
Enhancers that have rs540736209[chr2:38922816]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs540736209[chr2:38922816]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38922797 38922817 RREB1 JASPAR yes 73165845
chr2 38922799 38922819 RREB1 JASPAR yes 73165846
chr2 38922802 38922822 RREB1 JASPAR yes 73165847
chr2 38922803 38922818 RUNX2 JASPAR yes 73165848
chr2 38922806 38922826 RREB1 JASPAR yes 73165849
chr2 38922807 38922817 RUNX3 JASPAR yes 73165850
chr2 38922807 38922827 RREB1 JASPAR yes 73165851
chr2 38922808 38922817 RUNX2 JASPAR yes 73165852
chr2 38922811 38922831 RREB1 JASPAR yes 73165853
chr2 38922814 38922820 TCF4 TRANSFAC yes 73165854
chr2 38922814 38922826 FOXI1 JASPAR yes 73165855
Genes associated with rs540736209[chr2:38922816], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More