EnhancerDB
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  3. rs540752048[chr2:39633029]
Enhancers that have rs540752048[chr2:39633029]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39624677 39646761 enh18467
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Liver Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs540752048[chr2:39633029]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39633008 39633029 IRF1 JASPAR yes 73197215
chr2 39633022 39633037 FOXP1 JASPAR yes 73197219
chr2 39633028 39633034 TBP TRANSFAC yes 73197220
Genes associated with rs540752048[chr2:39633029], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More