EnhancerDB
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  3. rs540757208[chr17:2851264]
Enhancers that have rs540757208[chr17:2851264]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2849745 2866995 enh4215
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs540757208[chr17:2851264]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2851259 2851269 FIGLA JASPAR yes 52788389
chr17 2851259 2851269 ID4 JASPAR yes 52788390
chr17 2851259 2851269 MSC JASPAR yes 52788391
chr17 2851259 2851269 MYF6 JASPAR yes 52788392
chr17 2851259 2851269 TCF3 JASPAR yes 52788393
chr17 2851259 2851269 TCF4 JASPAR yes 52788394
chr17 2851260 2851269 SNAI2 JASPAR yes 52788395
chr17 2851261 2851266 USF2 TRANSFAC yes 52788396
Genes associated with rs540757208[chr17:2851264], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More