EnhancerDB
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  3. rs540762578[chr6:13409516]
Enhancers that have rs540762578[chr6:13409516]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13393585 13416889 enh8961
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540762578[chr6:13409516]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13409508 13409529 ZNF263 JASPAR yes 100027176
chr6 13409516 13409523 SPIB JASPAR yes 100027177
chr6 13409516 13409537 ZNF263 JASPAR yes 100027178
Genes associated with rs540762578[chr6:13409516], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More