EnhancerDB
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  3. rs540772929[chr10:27083192]
Enhancers that have rs540772929[chr10:27083192]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 27066185 27084275 enh1143
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Pancreas (Panc1) Blood (Karpas-422) Muscle (Myoblast) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs540772929[chr10:27083192]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 27083181 27083196 MEF2C JASPAR yes 126163377
chr10 27083182 27083197 MEF2A JASPAR yes 126163378
chr10 27083183 27083195 FOXC2 JASPAR yes 126163379
chr10 27083183 27083195 MEF2A JASPAR yes 126163380
chr10 27083183 27083195 MEF2B JASPAR yes 126163381
chr10 27083183 27083195 MEF2D JASPAR yes 126163382
chr10 27083184 27083194 MEF2A JASPAR yes 126163383
chr10 27083185 27083199 FOXF2 JASPAR yes 126163384
chr10 27083185 27083199 ONECUT2 JASPAR yes 126163385
chr10 27083185 27083199 ONECUT3 JASPAR yes 126163386
chr10 27083185 27083200 FOXP1 JASPAR yes 126163387
chr10 27083187 27083198 FOXC1 JASPAR yes 126163388
chr10 27083187 27083199 FOXC2 JASPAR yes 126163389
chr10 27083188 27083200 FOXI1 JASPAR yes 126163390
chr10 27083191 27083202 PROP1 JASPAR yes 126163391
Genes associated with rs540772929[chr10:27083192], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More