EnhancerDB
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  3. rs540773873[chr1:109781420]
Enhancers that have rs540773873[chr1:109781420]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 109778260 109787295 enh27060
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Ovary Blood (T-cell) Esophagus Astrocyte Stomach Muscle (A673) Uterus Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs540773873[chr1:109781420]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 109781127 109781438 ZNF274 GTRD no Bone Marrow (K562) 21326804
chr1 109781415 109781428 SMAD2 JASPAR yes 31418611
chr1 109781417 109781438 REST JASPAR yes 31418612
Genes associated with rs540773873[chr1:109781420], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More