EnhancerDB
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  3. rs540777320[chr1:224392297]
Enhancers that have rs540777320[chr1:224392297]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224381693 224395855 enh12716
Bone Marrow (K562) Astrocyte Colon (HCT116) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs540777320[chr1:224392297]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224391415 224394417 ZNF274 GTRD no Bone Marrow (K562) 21384208
chr1 224391415 224394417 ZNF274 GTRD no Bone Marrow (K562) 107873609
chr1 224392159 224393821 ZNF274 GTRD no Bone Marrow (K562) 21384209
chr1 224392159 224393821 ZNF274 GTRD no Bone Marrow (K562) 107873610
chr1 224392205 224392723 ZNF274 GTRD no Bone Marrow (K562) 21384210
chr1 224392211 224393435 ZNF274 GTRD no Bone Marrow (K562) 21384211
chr1 224392211 224393435 ZNF274 GTRD no Bone Marrow (K562) 107873611
chr1 224392220 224393423 ZNF274 GTRD no Bone Marrow (K562) 21384212
chr1 224392220 224393423 ZNF274 GTRD no Bone Marrow (K562) 107873612
chr1 224392239 224393980 ZNF274 GTRD no Bone Marrow (K562) 21384213
chr1 224392239 224393980 ZNF274 GTRD no Bone Marrow (K562) 107873613
chr1 224392275 224393094 ZNF274 GTRD no Bone Marrow (K562) 21384214
chr1 224392277 224392298 IRF1 JASPAR yes 35693605
chr1 224392279 224392300 IRF1 JASPAR yes 35693607
chr1 224392280 224394097 ZNF274 GTRD no Bone Marrow (K562) 21384215
chr1 224392280 224394097 ZNF274 GTRD no Bone Marrow (K562) 107873614
chr1 224392283 224392298 STAT2 JASPAR yes 35693608
chr1 224392285 224392306 IRF1 JASPAR yes 35693609
chr1 224392287 224392302 IRF9 JASPAR yes 35693610
chr1 224392288 224392302 IRF7 JASPAR yes 35693611
chr1 224392288 224392302 IRF8 JASPAR yes 35693612
chr1 224392289 224392303 STAT1 JASPAR yes 35693613
chr1 224392292 224393225 ZNF274 GTRD no Bone Marrow (K562) 21384216
chr1 224392293 224394186 ZNF274 GTRD no Bone Marrow (K562) 21384217
chr1 224392293 224394186 ZNF274 GTRD no Bone Marrow (K562) 107873615
chr1 224392296 224392306 TEAD4 JASPAR yes 35693614
Genes associated with rs540777320[chr1:224392297], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More