EnhancerDB
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  3. rs540778787[chr1:54766093]
Enhancers that have rs540778787[chr1:54766093]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54761072 54782679 enh11866
Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs540778787[chr1:54766093]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54763077 54767289 ZNF274 GTRD no Bone Marrow (K562) 107804699
chr1 54763077 54767289 ZNF274 GTRD no Bone Marrow (K562) 107804700
chr1 54763388 54766404 ZNF274 GTRD no Bone Marrow (K562) 107804705
chr1 54763388 54766404 ZNF274 GTRD no Bone Marrow (K562) 107804706
chr1 54763671 54766180 ZNF143 GTRD no Epithelial (MCF-7) 107804721
chr1 54766079 54766100 ZNF263 JASPAR yes 28970463
Genes associated with rs540778787[chr1:54766093], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More