EnhancerDB
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  3. rs540782254[chr11:123016337]
Enhancers that have rs540782254[chr11:123016337]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 122987085 123025975 enh14347
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540782254[chr11:123016337]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 123015766 123016342 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108004625
chr11 123015838 123016354 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21519758
chr11 123015838 123016354 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108004626
chr11 123015881 123016385 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21519763
chr11 123015881 123016385 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108004632
chr11 123016335 123016356 IRF1 JASPAR yes 42049822
chr11 123016337 123016352 FOXP1 JASPAR yes 42049823
Genes associated with rs540782254[chr11:123016337], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More