EnhancerDB
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  3. rs540785613[chr15:39475428]
Enhancers that have rs540785613[chr15:39475428]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 39472205 39509375 enh16053
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Placenta Colon (HCT116) Uterus Thyroid Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs540785613[chr15:39475428]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 39475338 39475734 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21648159
chr15 39475358 39475702 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21648160
chr15 39475375 39475652 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21648161
chr15 39475397 39475737 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21648162
chr15 39475411 39475731 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21648163
chr15 39475427 39475435 FOXL1 JASPAR yes 22860984
chr15 39475427 39475716 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21648164
Genes associated with rs540785613[chr15:39475428], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More