EnhancerDB
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  3. rs540800059[chr1:178629040]
Enhancers that have rs540800059[chr1:178629040]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178606845 178636895 enh759
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs540800059[chr1:178629040]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178628543 178629052 ZNF274 GTRD no Liver (HepG2) 21352857
chr1 178629033 178629045 BHLHE23 JASPAR yes 33435114
chr1 178629034 178629044 OLIG1 JASPAR yes 33435115
Genes associated with rs540800059[chr1:178629040], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More