EnhancerDB
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  3. rs540803506[chr12:122505279]
Enhancers that have rs540803506[chr12:122505279]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122495412 122508155 enh2656
Brain (SK-N-MC) Liver Astrocyte Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540803506[chr12:122505279]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122505277 122505286 ZEB1 JASPAR yes 124262401
chr12 122505278 122505288 FIGLA JASPAR yes 124262402
chr12 122505278 122505288 ID4 JASPAR yes 124262403
chr12 122505278 122505288 TCF3 JASPAR yes 124262404
chr12 122505278 122505288 TCF4 JASPAR yes 124262405
chr12 122505279 122505288 SNAI2 JASPAR yes 124262406
Genes associated with rs540803506[chr12:122505279], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More