EnhancerDB
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  3. rs540806002[chr1:224634577]
Enhancers that have rs540806002[chr1:224634577]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224633023 224649015 enh12718
Bone Marrow (K562) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540806002[chr1:224634577]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224634570 224634582 NHLH1 JASPAR yes 35703191
chr1 224634571 224634581 NHLH1 JASPAR yes 35703192
Genes associated with rs540806002[chr1:224634577], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More