EnhancerDB
  1. Home
  2. SNP
  3. rs540808220[chr7:105686573]
Enhancers that have rs540808220[chr7:105686573]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 105686265 105718733 enh9968
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540808220[chr7:105686573]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 105686566 105686581 AR JASPAR yes 16991931
chr7 105686573 105686586 SMAD2 JASPAR yes 16991932
Genes associated with rs540808220[chr7:105686573], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More