EnhancerDB
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  3. rs540812410[chr3:152854847]
Enhancers that have rs540812410[chr3:152854847]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 152853205 152865539 enh36001
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs540812410[chr3:152854847]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 152854832 152854847 FOXP1 JASPAR yes 6746427
chr3 152854832 152854847 MEF2C JASPAR yes 6746428
chr3 152854846 152854861 FOXP1 JASPAR yes 6746432
chr3 152854847 152854862 FOXP1 JASPAR yes 6746433
Genes associated with rs540812410[chr3:152854847], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More