EnhancerDB
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  3. rs540812971[chr12:113679808]
Enhancers that have rs540812971[chr12:113679808]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 113663085 113691755 enh2610
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540812971[chr12:113679808]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 113679802 113679816 SPI1 JASPAR yes 123819384
chr12 113679807 113679819 PROX1 JASPAR yes 123819385
chr12 113679807 113679825 NR3C1 JASPAR yes 123819386
Genes associated with rs540812971[chr12:113679808], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More