EnhancerDB
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  3. rs540820850[chr3:16091578]
Enhancers that have rs540820850[chr3:16091578]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 16088245 16123415 enh20381
Liver Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs540820850[chr3:16091578]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 16091563 16091578 RUNX2 JASPAR yes 694850
chr3 16091575 16091590 FOXP1 JASPAR yes 694851
chr3 16091576 16091597 IRF1 JASPAR yes 694852
Genes associated with rs540820850[chr3:16091578], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More