EnhancerDB
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  3. rs540836885[chr1:116894127]
Enhancers that have rs540836885[chr1:116894127]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116881229 116905675 enh581
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Astrocyte Stomach Muscle (A673) Thyroid Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs540836885[chr1:116894127]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116894110 116894131 IRF1 JASPAR yes 31799102
chr1 116894111 116894132 IRF1 JASPAR yes 31799103
chr1 116894115 116894136 IRF1 JASPAR yes 31799104
chr1 116894116 116894131 FOXP1 JASPAR yes 31799105
chr1 116894116 116894137 IRF1 JASPAR yes 31799106
chr1 116894120 116894135 STAT2 JASPAR yes 31799107
chr1 116894121 116894136 FOXP1 JASPAR yes 31799108
chr1 116894121 116894142 IRF1 JASPAR yes 31799109
chr1 116894125 116894140 STAT2 JASPAR yes 31799110
chr1 116894125 116894146 IRF1 JASPAR yes 31799111
chr1 116894126 116894141 FOXP1 JASPAR yes 31799112
Genes associated with rs540836885[chr1:116894127], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More