EnhancerDB
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  3. rs540843461[chr17:41084808]
Enhancers that have rs540843461[chr17:41084808]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41078737 41086095 enh32197
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Stomach Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Uterus Epithelial (MCF-7)
Transcript factors that have rs540843461[chr17:41084808]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41084795 41084810 FOXP1 JASPAR yes 54322524
chr17 41084796 41084811 FOXP1 JASPAR yes 54322525
chr17 41084797 41084812 FOXP1 JASPAR yes 54322526
chr17 41084797 41084818 IRF1 JASPAR yes 54322527
chr17 41084798 41084813 FOXP1 JASPAR yes 54322528
chr17 41084801 41084816 STAT2 JASPAR yes 54322529
Genes associated with rs540843461[chr17:41084808], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More