EnhancerDB
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  3. rs540851289[chr16:85594531]
Enhancers that have rs540851289[chr16:85594531]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540851289[chr16:85594531]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85592360 85594536 ZNF274 GTRD no Bone Marrow (K562) 21729152
chr16 85593773 85594682 TCF7L2 GTRD no Colon (HCT116) 21729203
chr16 85593846 85594538 TCF7L2 GTRD no Colon (HCT116) 21729204
chr16 85594251 85595299 ZNF143 GTRD no Epithelial (MCF-7) 21729207
chr16 85594254 85595337 ZNF274 GTRD no Bone Marrow (K562) 21729208
chr16 85594268 85594772 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729209
chr16 85594281 85594770 ZNF274 GTRD no Bone Marrow (K562) 21729210
Genes associated with rs540851289[chr16:85594531], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More