EnhancerDB
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  3. rs540856187[chr12:125161229]
Enhancers that have rs540856187[chr12:125161229]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125156845 125176489 enh15094
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540856187[chr12:125161229]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125160976 125161606 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108069290
chr12 125160992 125161277 ZNF274 GTRD no Bone Marrow (K562) 21581584
chr12 125160992 125161277 ZNF274 GTRD no Bone Marrow (K562) 108069291
chr12 125161222 125161240 TP53 JASPAR yes 124407289
chr12 125161226 125161236 GCM2 JASPAR yes 124407290
chr12 125161229 125161249 TP53 JASPAR yes 124407291
Genes associated with rs540856187[chr12:125161229], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More