EnhancerDB
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  3. rs540857570[chr17:986562]
Enhancers that have rs540857570[chr17:986562]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 977705 993285 enh32040
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Esophagus Astrocyte Stomach Muscle (A673) Peripheral Blood (MM.1S) Uterus Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs540857570[chr17:986562]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 986558 986569 CDX2 JASPAR yes 52655701
chr17 986559 986570 HOXA10 JASPAR yes 52655702
chr17 986560 986569 CDX1 JASPAR yes 52655703
chr17 986560 986570 HOXA13 JASPAR yes 52655704
chr17 986560 986570 HOXB13 JASPAR yes 52655705
chr17 986560 986570 HOXD13 JASPAR yes 52655706
Genes associated with rs540857570[chr17:986562], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More