EnhancerDB
  1. Home
  2. SNP
  3. rs540869387[chr6:25009546]
Enhancers that have rs540869387[chr6:25009546]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 24994525 25030795 enh9006
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs540869387[chr6:25009546]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25009537 25009554 BCL6B JASPAR yes 100812910
chr6 25009542 25009560 IRF2 JASPAR yes 100812911
chr6 25009543 25009564 IRF1 JASPAR yes 100812912
Genes associated with rs540869387[chr6:25009546], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More