EnhancerDB
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  3. rs540871029[chr12:50661449]
Enhancers that have rs540871029[chr12:50661449]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50631905 50661889 enh14703
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs540871029[chr12:50661449]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50661440 50661449 SNAI2 JASPAR yes 120825551
chr12 50661440 50661450 ID4 JASPAR yes 120825552
chr12 50661440 50661450 TCF3 JASPAR yes 120825553
chr12 50661440 50661450 TCF4 JASPAR yes 120825554
chr12 50661446 50661464 TP73 JASPAR yes 120825555
Genes associated with rs540871029[chr12:50661449], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More