EnhancerDB
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  3. rs540877071[chr2:26241798]
Enhancers that have rs540877071[chr2:26241798]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 26217845 26245475 enh18363
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540877071[chr2:26241798]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 26241778 26241799 IRF1 JASPAR yes 72517460
chr2 26241782 26241803 IRF1 JASPAR yes 72517461
chr2 26241783 26241798 FOXP1 JASPAR yes 72517462
chr2 26241783 26241804 IRF1 JASPAR yes 72517463
chr2 26241784 26241799 FOXP1 JASPAR yes 72517464
chr2 26241784 26241805 IRF1 JASPAR yes 72517465
chr2 26241788 26241809 IRF1 JASPAR yes 72517466
chr2 26241789 26241804 FOXP1 JASPAR yes 72517467
Genes associated with rs540877071[chr2:26241798], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More