EnhancerDB
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  3. rs540880382[chr3:57978915]
Enhancers that have rs540880382[chr3:57978915]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 57952365 57980395 enh7247
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540880382[chr3:57978915]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 57978908 57978921 TFAP2A JASPAR yes 2662062
chr3 57978908 57978921 TFAP2B JASPAR yes 2662063
chr3 57978908 57978921 TFAP2C JASPAR yes 2662064
chr3 57978909 57978920 EBF1 JASPAR yes 2662065
Genes associated with rs540880382[chr3:57978915], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More