EnhancerDB
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  3. rs540883111[chr2:68965099]
Enhancers that have rs540883111[chr2:68965099]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 68962809 68984475 enh5632
Skin (Keratinocyte) Blood (T-cell) Esophagus Blood (OCI-LY7) Blood (GM12878) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Uterus Thymus Stomach
chr2 68964895 68965352 vista31920
VISTA
Transcript factors that have rs540883111[chr2:68965099]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 68964840 68965196 IRF1 UCSC Txn Factor no Conserved 108432845
chr2 68965088 68965103 ESR2 JASPAR yes 22076344
chr2 68965088 68965103 ESR2 JASPAR yes 74792506
chr2 68965088 68965108 ESR1 JASPAR yes 22076345
chr2 68965088 68965108 ESR1 JASPAR yes 74792507
chr2 68965095 68965104 ZEB1 JASPAR yes 22076346
chr2 68965095 68965104 ZEB1 JASPAR yes 74792508
chr2 68965098 68965103 USF2 TRANSFAC yes 22076347
chr2 68965098 68965103 USF2 TRANSFAC yes 74792509
Genes associated with rs540883111[chr2:68965099], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More