EnhancerDB
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  3. rs540897573[chr2:238120987]
Enhancers that have rs540897573[chr2:238120987]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238097785 238124624 enh19388
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Lung Muscle (A673) Heart
Transcript factors that have rs540897573[chr2:238120987]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238120971 238120991 RREB1 JASPAR yes 82093363
chr2 238120973 238120993 RREB1 JASPAR yes 82093364
chr2 238120975 238120995 RREB1 JASPAR yes 82093365
chr2 238120977 238120992 RUNX2 JASPAR yes 82093366
chr2 238120980 238121000 RREB1 JASPAR yes 82093367
chr2 238120982 238121002 RREB1 JASPAR yes 82093368
chr2 238120984 238121004 RREB1 JASPAR yes 82093369
Genes associated with rs540897573[chr2:238120987], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More