EnhancerDB
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  3. rs540902776[chr17:12522632]
Enhancers that have rs540902776[chr17:12522632]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 12514965 12542595 enh16999
Skin (Keratinocyte) Liver (HepG2) Ovary Astrocyte Bone (Osteoblast) Placenta Uterus Muscle (Myoblast) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs540902776[chr17:12522632]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 12522171 12523727 ZNF143 GTRD no Epithelial (MCF-7) 21743104
chr17 12522171 12523727 ZNF143 GTRD no Epithelial (MCF-7) 108239342
chr17 12522187 12523595 ZNF143 GTRD no Epithelial (MCF-7) 21743105
chr17 12522187 12523595 ZNF143 GTRD no Epithelial (MCF-7) 108239343
chr17 12522221 12523831 ZBTB33 GTRD no Lung (A549) 108239344
chr17 12522234 12522636 ZNF143 GTRD no Epithelial (MCF-7) 21743106
chr17 12522240 12524173 ZBTB33 GTRD no Lung (A549) 108239345
chr17 12522253 12523552 ZNF143 GTRD no Epithelial (MCF-7) 21743107
chr17 12522253 12523552 ZNF143 GTRD no Epithelial (MCF-7) 108239346
chr17 12522265 12523421 ZBTB33 GTRD no Lung (A549) 108239347
chr17 12522279 12523734 ZBTB33 GTRD no Lung (A549) 108239348
chr17 12522315 12523753 ZBTB33 GTRD no Lung (A549) 108239349
chr17 12522330 12523648 ZBTB33 GTRD no Lung (A549) 108239350
chr17 12522334 12523620 ZBTB33 GTRD no Lung (A549) 108239351
chr17 12522364 12523310 ZBTB33 GTRD no Lung (A549) 108239352
chr17 12522379 12522796 ZNF143 GTRD no Epithelial (MCF-7) 21743108
chr17 12522429 12523609 ZNF143 GTRD no Epithelial (MCF-7) 21743109
chr17 12522429 12523609 ZNF143 GTRD no Epithelial (MCF-7) 108239353
chr17 12522434 12523649 ZBTB33 GTRD no Lung (A549) 108239354
chr17 12522469 12523764 ZBTB33 GTRD no Lung (A549) 108239355
chr17 12522476 12523311 TEF1 GTRD no Bone (Osteoblast) 21743110
chr17 12522476 12523311 TEF1 GTRD no Bone (Osteoblast) 108239356
chr17 12522543 12523694 ZBTB33 GTRD no Lung (A549) 108239357
chr17 12522589 12523596 ZNF274 GTRD no Cervix (HeLa-S3) 108239358
chr17 12522591 12523361 TCF7L2 GTRD no Colon (HCT116) 108239359
chr17 12522604 12523391 TCF7L2 GTRD no Colon (HCT116) 108239360
chr17 12522612 12523313 ZBTB33 GTRD no Lung (A549) 108239361
chr17 12522620 12522632 GLI2 JASPAR yes 53176622
chr17 12522620 12523400 ZBTB33 GTRD no Lung (A549) 108239362
chr17 12522626 12523357 ZBTB33 GTRD no Lung (A549) 108239363
chr17 12522628 12523395 ZBTB33 GTRD no Lung (A549) 108239364
chr17 12522628 12523806 ZNF143 GTRD no Epithelial (MCF-7) 21743111
chr17 12522628 12523806 ZNF143 GTRD no Epithelial (MCF-7) 108239365
chr17 12522630 12522642 MEF2A JASPAR yes 53176623
chr17 12522630 12522642 MEF2B JASPAR yes 53176624
chr17 12522631 12523593 ZNF143 GTRD no Epithelial (MCF-7) 21743112
chr17 12522631 12523593 ZNF143 GTRD no Epithelial (MCF-7) 108239366
chr17 12522632 12522636 TEAD2 TRANSFAC yes 53176625
chr17 12522632 12522637 TBP TRANSFAC yes 53176626
chr17 12522632 12522638 TMF TRANSFAC yes 53176627
Genes associated with rs540902776[chr17:12522632], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More