EnhancerDB
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  3. rs540916392[chr16:89540950]
Enhancers that have rs540916392[chr16:89540950]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89534745 89554855 enh32031
Liver Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs540916392[chr16:89540950]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89540946 89540957 FLI1 JASPAR yes 12348359
chr16 89540948 89540955 SPI1 JASPAR yes 12348360
chr16 89540948 89540956 FEV JASPAR yes 12348361
chr16 89540950 89540955 ETS2 TRANSFAC yes 12348362
Genes associated with rs540916392[chr16:89540950], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More