EnhancerDB
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  3. rs540916500[chr12:108708717]
Enhancers that have rs540916500[chr12:108708717]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 108689886 108710415 enh14968
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs540916500[chr12:108708717]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 108708705 108708726 IRF1 JASPAR yes 123591974
chr12 108708706 108708721 FOXP1 JASPAR yes 123591975
chr12 108708706 108708727 IRF1 JASPAR yes 123591976
chr12 108708707 108708718 FOXP2 JASPAR yes 123591977
chr12 108708707 108708728 IRF1 JASPAR yes 123591978
chr12 108708708 108708723 FOXP1 JASPAR yes 123591979
chr12 108708708 108708729 IRF1 JASPAR yes 123591980
chr12 108708709 108708730 IRF1 JASPAR yes 123591981
chr12 108708710 108708725 FOXP1 JASPAR yes 123591982
chr12 108708710 108708731 IRF1 JASPAR yes 123591983
chr12 108708711 108708726 FOXP1 JASPAR yes 123591984
chr12 108708711 108708732 IRF1 JASPAR yes 123591985
chr12 108708712 108708727 FOXP1 JASPAR yes 123591986
chr12 108708713 108708728 FOXP1 JASPAR yes 123591987
chr12 108708714 108708729 FOXP1 JASPAR yes 123591988
chr12 108708715 108708730 FOXP1 JASPAR yes 123591989
chr12 108708716 108708731 FOXP1 JASPAR yes 123591990
chr12 108708717 108708732 FOXP1 JASPAR yes 123591991
Genes associated with rs540916500[chr12:108708717], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More