EnhancerDB
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  3. rs540924866[chr1:151887506]
Enhancers that have rs540924866[chr1:151887506]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 151885865 151921875 enh624
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs540924866[chr1:151887506]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 151886491 151887836 AR GTRD no Prostate (PC-3) 21337976
chr1 151886629 151887880 P63 GTRD no Skin (Keratinocyte) 21337978
chr1 151886641 151887829 P63 GTRD no Skin (Keratinocyte) 21337979
chr1 151886693 151887513 ZNF143 GTRD no Epithelial (MCF-7) 21337980
chr1 151886786 151887847 P63 GTRD no Skin (Keratinocyte) 21337982
chr1 151886870 151887799 P63 GTRD no Skin (Keratinocyte) 21337987
chr1 151886945 151887530 ZNF274 GTRD no Cervix (HeLa-S3) 21337989
chr1 151886955 151887608 TCF7L2 GTRD no Colon (HCT116) 21337990
chr1 151886982 151887519 ERG GTRD no Prostate (RWPE1) 21337991
chr1 151887001 151887513 ZNF143 GTRD no Epithelial (MCF-7) 21337992
chr1 151887072 151887728 TEF1 GTRD no Bone (Osteoblast) 21337995
Genes associated with rs540924866[chr1:151887506], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More