EnhancerDB
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  3. rs540929276[chr12:53264355]
Enhancers that have rs540929276[chr12:53264355]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53249369 53285465 enh14733
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr12 53264136 53264576 vista13489
VISTA
Transcript factors that have rs540929276[chr12:53264355]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53263988 53264644 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21547629
chr12 53263988 53264644 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108034379
chr12 53264063 53264373 POU2F2 UCSC Txn Factor no Conserved 108034380
chr12 53264070 53264646 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21547630
chr12 53264070 53264646 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108034381
chr12 53264148 53264558 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21547631
chr12 53264148 53264558 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108034384
chr12 53264174 53264538 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108034385
chr12 53264190 53264878 CTCF UCSC Txn Factor no Conserved 108034386
chr12 53264211 53264615 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21547632
chr12 53264211 53264615 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108034387
chr12 53264228 53264604 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21547633
chr12 53264228 53264604 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034388
chr12 53264245 53264709 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21547634
chr12 53264245 53264709 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034389
chr12 53264257 53264627 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21547635
chr12 53264257 53264627 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108034390
chr12 53264272 53264542 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108034391
chr12 53264276 53264636 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108034392
chr12 53264282 53264612 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21547636
chr12 53264282 53264612 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108034393
chr12 53264285 53264605 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108034394
chr12 53264286 53264596 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21547637
chr12 53264286 53264596 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108034395
chr12 53264289 53264579 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21547638
chr12 53264289 53264579 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108034396
chr12 53264291 53264555 RAD21 UCSC Txn Factor no Conserved 108034397
chr12 53264306 53264596 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108034398
chr12 53264307 53264587 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21547639
chr12 53264307 53264587 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108034399
chr12 53264311 53264571 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21547640
chr12 53264311 53264571 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034400
chr12 53264313 53264592 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21547641
chr12 53264313 53264592 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108034401
chr12 53264320 53264550 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21547642
chr12 53264320 53264550 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108034402
chr12 53264322 53264612 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108034403
chr12 53264323 53264540 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21547643
chr12 53264323 53264540 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108034404
chr12 53264323 53264544 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21547644
chr12 53264323 53264544 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108034405
chr12 53264329 53264541 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108034406
chr12 53264331 53264592 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21547645
chr12 53264331 53264592 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108034407
chr12 53264335 53264556 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21547646
chr12 53264335 53264556 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034408
chr12 53264341 53264554 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21547647
chr12 53264341 53264554 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108034409
chr12 53264349 53264522 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108034410
Genes associated with rs540929276[chr12:53264355], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More