EnhancerDB
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  3. rs540932358[chr17:49038889]
Enhancers that have rs540932358[chr17:49038889]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49015225 49039275 enh17224
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540932358[chr17:49038889]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49038264 49038918 ZNF274 GTRD no Liver (HepG2) 21771979
chr17 49038305 49038926 ZNF274 GTRD no Bone Marrow (K562) 21771980
chr17 49038317 49040334 ZNF143 GTRD no Epithelial (MCF-7) 21771981
chr17 49038366 49038952 ZNF274 GTRD no Liver (HepG2) 21771982
chr17 49038367 49038917 ZNF274 GTRD no Cervix (HeLa-S3) 21771983
chr17 49038386 49038921 ZNF274 GTRD no Liver (HepG2) 21771984
chr17 49038655 49040458 ZNF143 GTRD no Epithelial (MCF-7) 21771985
chr17 49038657 49040455 ZNF143 GTRD no Epithelial (MCF-7) 21771986
chr17 49038690 49040579 ZNF143 GTRD no Epithelial (MCF-7) 21771987
chr17 49038707 49040544 ZNF143 GTRD no Epithelial (MCF-7) 21771988
chr17 49038721 49038945 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21771989
chr17 49038751 49040385 ZNF143 GTRD no Epithelial (MCF-7) 21771990
chr17 49038771 49039686 AR GTRD no Prostate (PC-3) 21771991
chr17 49038804 49040629 ZNF143 GTRD no Epithelial (MCF-7) 21771992
chr17 49038839 49040378 ZNF143 GTRD no Epithelial (MCF-7) 21771993
chr17 49038852 49040397 ZNF143 GTRD no Epithelial (MCF-7) 21771994
chr17 49038879 49038896 BCL6B JASPAR yes 54739770
chr17 49038880 49038894 EBF1 JASPAR yes 54739771
chr17 49038881 49038892 EBF1 JASPAR yes 54739772
Genes associated with rs540932358[chr17:49038889], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More