EnhancerDB
  1. Home
  2. SNP
  3. rs540941513[chr12:107424409]
Enhancers that have rs540941513[chr12:107424409]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 107417025 107427075 enh14964
Brain (SK-N-MC) Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Lung Heart
Transcript factors that have rs540941513[chr12:107424409]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 107423592 107425001 ZNF143 GTRD no Epithelial (MCF-7) 21570347
chr12 107423592 107425001 ZNF143 GTRD no Epithelial (MCF-7) 108056158
chr12 107424391 107424410 PAX5 JASPAR yes 123531173
Genes associated with rs540941513[chr12:107424409], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More