EnhancerDB
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  3. rs540943[chr11:65910129]
Enhancers that have rs540943[chr11:65910129]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 65889425 65921015 enh1832
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr11 65910089 65910568 vista10652
VISTA
Transcript factors that have rs540943[chr11:65910129]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 65908959 65910185 ZNF274 GTRD no Bone Marrow (K562) 21496420
chr11 65908959 65910185 ZNF274 GTRD no Bone Marrow (K562) 107982458
chr11 65910004 65911149 ZNF274 GTRD no Blood (GM12878) 21496421
chr11 65910004 65911149 ZNF274 GTRD no Blood (GM12878) 107982459
chr11 65910027 65910895 ZNF274 GTRD no Blood (GM12878) 21496422
chr11 65910027 65910895 ZNF274 GTRD no Blood (GM12878) 107982460
chr11 65910119 65910137 NR3C1 JASPAR yes 39355983
chr11 65910119 65910137 NR3C1 JASPAR yes 114089274
chr11 65910121 65910131 EVX1 JASPAR yes 39355984
chr11 65910121 65910131 EVX2 JASPAR yes 39355985
chr11 65910121 65910131 MEOX1 JASPAR yes 39355986
chr11 65910121 65910131 MEOX2 JASPAR yes 39355987
chr11 65910121 65910131 EVX1 JASPAR yes 114089275
chr11 65910121 65910131 EVX2 JASPAR yes 114089276
chr11 65910121 65910131 MEOX1 JASPAR yes 114089277
chr11 65910121 65910131 MEOX2 JASPAR yes 114089278
chr11 65910123 65910134 PHOX2A JASPAR yes 39355988
chr11 65910123 65910134 PHOX2A JASPAR yes 114089279
chr11 65910125 65910665 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107982461
chr11 65910128 65910612 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107982462
Genes associated with rs540943[chr11:65910129], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More