EnhancerDB
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  3. rs540950667[chr18:57549329]
Enhancers that have rs540950667[chr18:57549329]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 57537325 57555285 enh17763
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Stomach
Transcript factors that have rs540950667[chr18:57549329]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 57549061 57549605 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21824727
chr18 57549066 57549342 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21824728
chr18 57549171 57549507 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21824729
chr18 57549183 57549438 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21824730
chr18 57549195 57549485 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21824731
chr18 57549248 57549387 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21824732
chr18 57549318 57549331 ELF1 JASPAR yes 111060753
chr18 57549328 57549334 LEF1 TRANSFAC yes 111060755
chr18 57549328 57549334 SOX10 JASPAR yes 111060756
chr18 57549328 57549343 FOXP1 JASPAR yes 111060757
chr18 57549329 57549341 FOXC2 JASPAR yes 111060758
Genes associated with rs540950667[chr18:57549329], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More