EnhancerDB
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  3. rs540951580[chr15:99257941]
Enhancers that have rs540951580[chr15:99257941]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 99254489 99264964 enh16456
Prostate (PC-3) Prostate (RWPE1) Esophagus Stomach Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Blood (T-cell) Heart
chr15 99257740 99262228 vista530
VISTA
Transcript factors that have rs540951580[chr15:99257941]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 99257932 99257944 MEF2A JASPAR yes 25824035
chr15 99257932 99257944 MEF2B JASPAR yes 25824036
chr15 99257932 99257944 MEF2D JASPAR yes 25824037
chr15 99257932 99257944 MEF2A JASPAR yes 111864144
chr15 99257932 99257944 MEF2B JASPAR yes 111864145
chr15 99257932 99257944 MEF2D JASPAR yes 111864146
chr15 99257934 99257945 CDX2 JASPAR yes 25824038
chr15 99257934 99257945 CDX2 JASPAR yes 111864147
chr15 99257934 99257949 FOXP1 JASPAR yes 25824039
chr15 99257934 99257949 FOXP1 JASPAR yes 111864148
chr15 99257935 99257946 HOXA10 JASPAR yes 25824040
chr15 99257935 99257946 HOXA10 JASPAR yes 111864149
chr15 99257936 99257945 CDX1 JASPAR yes 25824041
chr15 99257936 99257945 CDX1 JASPAR yes 111864150
chr15 99257936 99257946 HOXA13 JASPAR yes 25824042
chr15 99257936 99257946 HOXB13 JASPAR yes 25824043
chr15 99257936 99257946 HOXD13 JASPAR yes 25824044
chr15 99257936 99257946 HOXA13 JASPAR yes 111864151
chr15 99257936 99257946 HOXB13 JASPAR yes 111864152
chr15 99257936 99257946 HOXD13 JASPAR yes 111864153
chr15 99257936 99257951 MEF2C JASPAR yes 25824045
chr15 99257936 99257951 MEF2C JASPAR yes 111864154
chr15 99257937 99257958 IRF1 JASPAR yes 25824046
chr15 99257937 99257958 IRF1 JASPAR yes 111864155
chr15 99257940 99257946 TBP TRANSFAC yes 25824047
chr15 99257940 99257946 TBP TRANSFAC yes 111864156
chr15 99257941 99257956 PRDM1 JASPAR yes 25824048
chr15 99257941 99257956 PRDM1 JASPAR yes 111864157
Genes associated with rs540951580[chr15:99257941], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More