EnhancerDB
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  3. rs540963229[chr19:11057295]
Enhancers that have rs540963229[chr19:11057295]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 11044165 11061272 enh17918
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs540963229[chr19:11057295]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 11056027 11057516 TCF7L2 GTRD no Colon (HCT116) 21849283
chr19 11057164 11057561 ZNF143 GTRD no Epithelial (MCF-7) 21849287
chr19 11057292 11057307 FOXP1 JASPAR yes 112447803
chr19 11057293 11057308 FOXP1 JASPAR yes 112447804
chr19 11057294 11057309 FOXP1 JASPAR yes 112447805
chr19 11057295 11057310 FOXP1 JASPAR yes 112447806
chr19 11057295 11057316 IRF1 JASPAR yes 112447807
Genes associated with rs540963229[chr19:11057295], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More