EnhancerDB
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  3. rs540964079[chr12:94097754]
Enhancers that have rs540964079[chr12:94097754]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 94088325 94110497 enh29875
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Colon (HCT116) Peripheral Blood (MM.1S) Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs540964079[chr12:94097754]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 94097744 94097765 IRF1 JASPAR yes 122872689
chr12 94097746 94097761 PRDM1 JASPAR yes 122872690
chr12 94097748 94097769 IRF1 JASPAR yes 122872691
chr12 94097749 94097764 FOXP1 JASPAR yes 122872692
chr12 94097749 94097770 IRF1 JASPAR yes 122872693
chr12 94097750 94097771 IRF1 JASPAR yes 122872694
chr12 94097751 94097766 FOXP1 JASPAR yes 122872695
chr12 94097751 94097772 IRF1 JASPAR yes 122872696
chr12 94097752 94097773 IRF1 JASPAR yes 122872697
chr12 94097753 94097768 FOXP1 JASPAR yes 122872698
chr12 94097753 94097774 IRF1 JASPAR yes 122872699
chr12 94097754 94097769 FOXP1 JASPAR yes 122872700
chr12 94097754 94097775 IRF1 JASPAR yes 122872701
Genes associated with rs540964079[chr12:94097754], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More