EnhancerDB
  1. Home
  2. SNP
  3. rs540969563[chr1:218631076]
Enhancers that have rs540969563[chr1:218631076]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 218626305 218642655 enh27510
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540969563[chr1:218631076]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 218631061 218631076 FOXA1 JASPAR yes 35381081
chr1 218631062 218631077 FOXP1 JASPAR yes 35381082
Genes associated with rs540969563[chr1:218631076], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More