EnhancerDB
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  3. rs540998284[chr1:17898199]
Enhancers that have rs540998284[chr1:17898199]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17883825 17906655 enh11558
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs540998284[chr1:17898199]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17898197 17898212 MEF2A JASPAR yes 27103341
chr1 17898198 17898213 MEF2C JASPAR yes 27103342
chr1 17898199 17898211 MEF2A JASPAR yes 27103343
chr1 17898199 17898211 MEF2B JASPAR yes 27103344
chr1 17898199 17898211 MEF2D JASPAR yes 27103345
Genes associated with rs540998284[chr1:17898199], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More