EnhancerDB
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  3. rs541017599[chr12:46868744]
Enhancers that have rs541017599[chr12:46868744]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46859389 46872155 enh14677
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs541017599[chr12:46868744]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46868741 46868751 OLIG1 JASPAR yes 120626306
chr12 46868741 46868751 OLIG2 JASPAR yes 120626307
chr12 46868741 46868751 OLIG3 JASPAR yes 120626308
Genes associated with rs541017599[chr12:46868744], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More