EnhancerDB
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  3. rs541022534[chr17:75309254]
Enhancers that have rs541022534[chr17:75309254]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 75303345 75332203 enh4616
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs541022534[chr17:75309254]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 75309243 75309258 HNF4A JASPAR yes 56065523
chr17 75309244 75309258 NR2F1 JASPAR yes 56065524
chr17 75309244 75309259 HNF4G JASPAR yes 56065525
chr17 75309249 75309256 E2F1 TRANSFAC yes 56065526
chr17 75309250 75309265 HNF4A JASPAR yes 56065527
chr17 75309251 75309265 NR2F1 JASPAR yes 56065528
chr17 75309251 75309266 HNF4G JASPAR yes 56065529
chr17 75309251 75309266 NR2C2 JASPAR yes 56065530
Genes associated with rs541022534[chr17:75309254], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More