EnhancerDB
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  3. rs541063024[chr10:89912501]
Enhancers that have rs541063024[chr10:89912501]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 89905225 89921155 enh28319
Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs541063024[chr10:89912501]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 89912324 89912974 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448381
chr10 89912324 89912974 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929864
chr10 89912371 89912875 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448382
chr10 89912371 89912875 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929865
chr10 89912374 89912951 POLR2A UCSC Txn Factor no Conserved 107929866
chr10 89912385 89912895 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448383
chr10 89912385 89912895 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929867
chr10 89912423 89912890 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448384
chr10 89912423 89912890 TFAP2C UCSC Txn Factor no Conserved 107929868
chr10 89912423 89912890 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929869
chr10 89912427 89912823 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448385
chr10 89912427 89912823 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929870
chr10 89912428 89912875 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448386
chr10 89912428 89912875 TFAP2A UCSC Txn Factor no Conserved 107929871
chr10 89912428 89912875 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929872
chr10 89912433 89912903 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21448387
chr10 89912433 89912903 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107929873
chr10 89912433 89912933 GATA3 UCSC Txn Factor no Conserved 107929874
chr10 89912441 89912824 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448388
chr10 89912441 89912824 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929875
chr10 89912454 89912870 MYC UCSC Txn Factor no Conserved 107929876
chr10 89912459 89912979 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107929877
chr10 89912465 89913061 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107929878
chr10 89912475 89912951 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448389
chr10 89912475 89912951 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929879
chr10 89912477 89912833 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21448390
chr10 89912477 89912833 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107929880
chr10 89912491 89913011 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107929881
chr10 89912492 89912831 GATA2 UCSC Txn Factor no Conserved 107929882
chr10 89912492 89912848 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448391
chr10 89912492 89912848 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929883
chr10 89912497 89912512 AR JASPAR yes 128926146
Genes associated with rs541063024[chr10:89912501], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More