EnhancerDB
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  3. rs541095223[chr1:21589852]
Enhancers that have rs541095223[chr1:21589852]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21585105 21605175 enh26575
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs541095223[chr1:21589852]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21589837 21589852 MEF2C JASPAR yes 27288406
chr1 21589839 21589854 FOXP1 JASPAR yes 27288407
chr1 21589843 21589858 MEF2C JASPAR yes 27288408
chr1 21589843 21589864 IRF1 JASPAR yes 27288409
chr1 21589844 21589856 MEF2A JASPAR yes 27288410
chr1 21589844 21589856 MEF2D JASPAR yes 27288411
chr1 21589844 21589859 FOXA1 JASPAR yes 27288412
chr1 21589845 21589857 FOXI1 JASPAR yes 27288413
chr1 21589846 21589858 FOXC2 JASPAR yes 27288414
chr1 21589846 21589860 ONECUT2 JASPAR yes 27288415
chr1 21589846 21589860 ONECUT3 JASPAR yes 27288416
chr1 21589847 21589858 FOXB1 JASPAR yes 27288417
chr1 21589847 21589858 FOXC1 JASPAR yes 27288418
chr1 21589848 21589852 YY1 TRANSFAC yes 27288419
chr1 21589849 21589864 FOXP1 JASPAR yes 27288420
chr1 21589849 21589870 IRF1 JASPAR yes 27288421
chr1 21589850 21589862 FOXC2 JASPAR yes 27288422
chr1 21589852 21589856 YY1 TRANSFAC yes 27288423
Genes associated with rs541095223[chr1:21589852], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More