EnhancerDB
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  3. rs541102011[chr2:38928172]
Enhancers that have rs541102011[chr2:38928172]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs541102011[chr2:38928172]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38928167 38928179 PKNOX1 JASPAR yes 73166773
chr2 38928167 38928179 PKNOX2 JASPAR yes 73166774
chr2 38928167 38928179 TGIF1 JASPAR yes 73166775
chr2 38928167 38928179 TGIF2 JASPAR yes 73166776
Genes associated with rs541102011[chr2:38928172], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More